Tuesday, July 30, 2013

Neoadjuvant trial of Ganetespib shows promise for TNBC and HER2+ BC


Can not tell how durable is the response from the neoadjuvant study, but the response rate is phenomenal, especially when considering the abysmal record of TNBC treatmnet.
http://www.heraldonline.com/2013/07/29/5061751/synta-announces-enchant-1-breast.html


Ganetespib also shows good performance against some types of lung cancer:
http://medicalxpress.com/news/2012-01-ganetespib-kras-mutant-nsclc-monotherapy-combinations.html

It's possible that the cure for BC requires combo of several targetted therapies at the same time.

Saturday, July 27, 2013

YADT for TNBC


http://www.a-star.edu.sg/Media/News/PressReleases/tabid/828/articleType/ArticleView/articleId/1855/Default.aspx

Yet Another Drug Target for TNBC: UBASH3B
Interesting, though the drug development would be 10 years later.


Some paper for mass scale stem cell generated liver cells:
http://www.liebertpub.com/global/pressrelease/human-stem-cell-derived-hepatocytes-regenerate-liver-function-and-extend-survival-in-mice-with-hepatic-failure/1287/ 

Human Stem Cell-Derived Hepatocytes Regenerate Liver Function and Extend Survival in Mice with Hepatic Failure
New Rochelle, NY, July 26, 2013 -- Researchers have generated functional hepatocytes from human stem cells, transplanted them into mice with acute liver injury, and shown the ability of these stem-cell derived human liver cells to function normally and increase survival of the treated animals. This promising advance in the development of cell-based therapies to treat liver failure resulting from injury or disease relied on the development of scalable, reproducible methods to produce stem cell-derived hepatocytes in bioreactors, as described in an article in Stem Cells and Development, a peer-reviewed journal from Mary Ann Liebert, Inc., publishers. The article is available free on the Stem Cells and Development website.

Massoud Vosough and coauthors demonstrate a large-scale, integrated manufacturing strategy for generating functional hepatocytes in a single suspension culture grown in a scalable stirred bioreactor. In the article "Generation of Functional Hepatocyte-Like Cells from Human Pluripotent Stem Cells in a Scalable Suspension Culture" the authors describe the method used for scale-up, differentiation of the pluripotent stem cells into liver cells, and characterization and purification of the hepatocytes based on their physiological properties and the expression of liver cell biomarkers.

David C. Hay, MRC Centre for Regenerative Medicine, University of Edinburgh, U.K., comments on the importance of Vosough et al.'s contribution to the scientific literature in his editorial in Stem Cells and Development entitled "Rapid and Scalable Human Stem Cell Differentiation: Now in 3D." The researchers"developed a system for mass manufacture of stem cell derived hepatocytes in numbers that would be useful for clinical application," creating possibilities for future "immune matched cell based therapies," says Hay. Such approaches could be used to correct mutated genes in stem cell populations prior to differentiation and transplantation, he adds.

Thursday, July 25, 2013

Stem cell mutation and Marfan's disease/allergy

Stem cell mutation may confer metastasis risk:
http://www.obgynnews.com/news/top-news/single-article/stem-cell-mutations-in-breast-cancer-may-confer-metastatic-risk/a9fff020376e6e3bf3fe9667100905b6.html?tx_ttnews%5BsViewPointer%5D=1


In separate news, rare Marfan's syndrome shed light on a common affliction of allergy and asthma:
Losartan's effects on TGF-beta were discovered by Dietz and colleagues. His group subsequently showed that losartan can halt the dangerous ballooning of the aorta caused by abnormal TGF-beta in patients with Marfan and Loeys-Dietz syndromes
http://www.eurekalert.org/pub_releases/2013-07/jhm-jhr071813.php
http://www.hopkinschildrens.org/Aortic-Aneurysm-Growth-Treatment-in-Marfan-Syndrome.aspx


Sunday, July 21, 2013

Mathematical model of dual targetting cancer therapy

data based on melanoma.
Title:  Evolution dynamics of Cancer in response to targetted combination therapy.
The word "cure" actually appears here.    Though it may not apply to BC but the logic used is generally applicable and fairly interesting:
http://elife.elifesciences.org/content/2/e00747


Another article on heterogeneity of breast cancer from serum CTC:
 2013 Aug;274(2):137-43. doi: 10.1111/joim.12047.

Circulating tumour cells: insights into tumour heterogeneity.

http://www.ncbi.nlm.nih.gov/pubmed/23844916
http://onlinelibrary.wiley.com/doi/10.1111/joim.12047/full


Another  article on the history of "Cell Kill" Adjuvant chemotherapy approaches of last 50 years, and inflammation-cancer link

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3691519/

"DIGGING DEEPER: GROWTH PARAMETERS OF SOLID TUMORS CAUSE CHEMOTHERAPY RESISTANCE"

Friday, July 12, 2013

Nature's review of targetted BC medicine in clinical trials

Article in Nature:

"Emerging targeted agents in metastatic breast cancer"

Dimitrios Zardavas, José Baselga & Martine Piccart

The same article has list of targetted medicine for drugs targetting microenvironment:
http://www.nature.com/nrclinonc/journal/v10/n4/fig_tab/nrclinonc.2013.29_T3.html

targetting BC cells in general:
http://www.nature.com/nrclinonc/journal/v10/n4/fig_tab/nrclinonc.2013.29_T1.html

targetting BC stem cells:
http://www.nature.com/nrclinonc/journal/v10/n4/fig_tab/nrclinonc.2013.29_T2.html


Even a result table for trials which has been completed:
http://www.nature.com/nrclinonc/journal/v10/n4/fig_tab/nrclinonc.2013.29_T4.html

Add up CR+PR+SD divide it with total n to get how good early results are.   Unfortunately no progression free survival information on the table.    A  cursory look at the table tells me the best, by head and legs are palbociclib for ER+ women with (PR+SD = 26 among 34 patients):
Letrozole ± PD 033299181CDK1, CDK6

These are very interesting especially if they work for TN women, or could figure out accurate dx test to identify the people who might benefit better:
Cabozantinib222MET, VEGFR2
Dovitinib60FGFR1, VEGFR, PDGFRβ, KIT, FLT3
Vorinostat (+ ixabepilone)225HDACI36AllAll2616
Bosutinib231SRCII73AllChemotherapy and/or hormone therapy0424
BKM120217PI3KI9AllAny015
BKM120 (+ letrozole)218PI3KI51ER+/HER2–AI1113

If someone's interested in any of these products, go back to Table 1 or table 2 or table 3, look for the other drugs with similar targets.    For example, if you are interested in PD 0332991 (palbociclib), go back to table 1 to look for other CDK targetting compounds.   Law of economics would suggest that those drugs will compete well and/or completement well with palbociclib.   No guarantee of course.

(Clinical Trial Conjecture I: The Conjecture of Achilles Heel:   As soon as someone proved that Achilles has a weakness in his heel, all the arrows from Troy's side is gonna go to the heel until Achilles, the invincible becomes vincible and his heel will look like porcupine.)

Notice also the drugs for whom the results are not so good or even abysmal.    Some are not good but has Complete response, that's still interesting.   Some may need to pair up with other drugs to perform well.   Some may need better diagnostic test to target better.     Remember HIV became treatable with a drug cocktail and cancer may be treatable too from a targetted drug cocktail.   So not to write any out, but a lot of work needs to be done if so many phase I/II trials are not turning out gold.  

There are probably many more drugs whose results are not in yet, or are dropped due to poor results, poor recruitment or for other technical or business reasons.     That is the invisible story of breast canc er clinical research.   We need more open data, more better designed drug clinical tests for new agents.

Natada in inspire shared these:
http://www.inspire.com/groups/advanced-breast-cancer/discussion/targetd-therapy-clinical-trial-for-breast-cancer-stem-cells-and-mbc/


Nice figure here:
http://www.nature.com/nrclinonc/journal/v10/n4/fig_tab/nrclinonc.2013.29_F1.html#figure-title
http://www.nature.com/nrclinonc/journal/v10/n4/fig_tab/nrclinonc.2013.29_F2.html

I might as well go into the Clinical Trial Conjecture II:
The Conjecture of Innovation being proportional to iteration speed:   The shorter time between lab bench to FDA approval, the faster the disease will get an effective cure.  and vice versa.

Comment:  neoadjuvant trials like ISPY-2 are going to accelerate the pace of BC innovation
http://clinicaltrials.gov/show/NCT01042379


and the Breast Cancer Clinical Trial Conjecture III:
The Conjecture of Good being the Enemy of the Best:  Adjuvant usage of ok drugs for early stage breast cancer may save lives, but they reduce the incentive for actual great drugs that cures late stage breast cancer.

Comment: This is caused by the unique character of breast cancer where early stage breast cancer rarely kills but are extremely common, yet because late stage breast cancer remains a killer, there are vastly more incentive to develop ok drugs for adjuvant use, vs great drugs for late stage bc patients.   It seems a lot of pharma would rather repurpose a proven ok cancer drug (developed for a different cancer), spend 10 years and 100s of millions to test its efficacy for breast cancer in adjuvant settings, rather than starting from scratch on new drugs that could potentially cure MBC.    You could argue the latter is more risky, or you could argue that the former gets better pay-off in adjuvant use on less risk.


Monday, July 8, 2013

HR+ breast cancer flipping biomarkers


I have reason to suspect HR+ breast cancer (even stage IVers) is going to get a cure (90+% 5 year survivability) pretty soon, within a few years.    But cancer is an evolutionary disease.   So I'm interested in understanding the phenomenon of HR+ BC flipping into triple negative type BC.

http://breast-cancer-research.com/content/14/3/r71



http://www.medscape.com/viewarticle/805441_4

Total of 11 triple negative patients.  5 of whom were stage III at start of study.   6 of whom were either NED stage IV or maybe stage II.    Total of 2 relapsed.   Very small study.

Quote from this article:  To gain a better understanding of the targets of TM, we measured circulating markers of angiogenesis. SDF1 and its receptor CXCR4, involved in angiogenesis and metastatic progression, may have a role in EPC recruitment.[36,37] In breast cancer patients, expression of SDF1 has been inversely correlated with survival.[38] In our study, SDF1 decreased with copper depletion but increased before relapse. Likewise, MMPs increased in patients before relapse. MMPs regulate tumor growth and invasion[36] and provide a permissive bone marrow niche to facilitate mobilization of progenitor cells.[39] Our observations suggest that SDF1 and MMPs may have important roles in metastatic progression.
Though a randomized clinical trial is necessary to assess survival, efficacy measures were promising. Of 11 triple-negative patients on study, only 2 relapsed. One patient did not adequately copper-deplete despite incremental dose increases. The other patient progressed within 2 months of TM therapy, suggesting that active neoangiogenesis was occurring at the time of enrollment, which could not be halted due to delayed effects of copper depletion. We are cautiously optimistic about the low incidence of relapse and have extended the study to 6 years in selected patients. Two stage-4 NED triple-negative patients remain disease-free at 65 and 49 months on TM therapy, which is encouraging given the dismal median survival of 9 months in metastatic triple-negative patients

http://www.ncbi.nlm.nih.gov/pubmed/23686707

http://www.ncbi.nlm.nih.gov/pubmed/22825030

http://www.ncbi.nlm.nih.gov/pubmed/22510516



I'm reading this with interest because ovarian cancer is linked and related to some type of TN breast cancer
http://www.cancernetwork.com/ovarian-cancer/content/article/10165/2148722

Monday, July 1, 2013

Should Cancer Clinical Trial Data be Open Sourced?

Every year hundreds of new agents are touted as potential cure for metastatic breast cancer and other deadly cancers.   Few got into early stage human trials often by small startup companies.   Some do well, some do ok, some do badly.     Big Pharmas could afford to buy dozens of these small startup companies.   And mostly these new agents are never heard from again.  The public has no idea which ones do well, ok, or badly.  These results were sealed,  should they be somehow accessible to public?   
Several related issues about metastatic breast cancer funding and drug development are discussed here:
Etacstil was once a promising breast cancer drug that performed ok or better in early stage human trial, but the company was acquired by BMS, and its early stage human trial's data was never published.   When its development and clinical trial was abandoned and existant tablets destroyed by BMS, patients who were doing well on that drug sued to try to stay on the drug, but to this day, results on its performance IS NOT accessible by public:
This movement towards data openness started in Flu treatment, but will not end there.   
Also in today's news, another *attempted* acquisition of a big cancer drug maker onyx by other even bigger drug maker amgen.   How does drug development for MBC and other deadly cancers changes with this kind of consolidation going on all the time?   Which project (on either side) will live, which project will die?   What happens to the acquired clinical trial data under the new overlord?   


Big Pharma, little pharma are like any other business.   When the public hold out money without asking questions or putting in check/balances, it will ALWAYS be taken advantage of.
My question is:
How should we help in finding a metastatic breast cancer cure?   What change should we make in our laws and healthcare strategy?   Who should we recruit to make such changes?   FTC and/or  FDA?  researchers?  economists?  computer geeks?  media?

http://www.xconomy.com/national/2013/07/29/pharma-fails-credibility-test-misses-opportunity-on-transparency/?utm_source=rss&utm_medium=rss&utm_campaign=pharma-fails-credibility-test-misses-opportunity-on-transparency